BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005A08LP1|AL425313
(955 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1718 1796 0.0
3x_Contig105 784 0.0
>3x_Contig1718
Length = 19496
Score = 1796 bits (903), Expect = 0.0
Identities = 950/961 (98%), Gaps = 6/961 (0%)
Strand = Plus / Plus
Query: 1 gatttattcagcttatcaaagtccgaccaagagcgcmgc-agaaacgaagattgcaaagt 59
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 6459 gatttattcagcttatcaaagtccgaccaagagcgcagccagaaacgaagattgcaaagt 6518
Query: 60 caaagagattttgaaagtggtgttttgccttcgtcaaggctgccggatgagccatacaag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6519 caaagagattttgaaagtggtgttttgccttcgtcaaggctgccggatgagccatacaag 6578
Query: 120 tataagaaaagacggagaacaacaacgatagaagaaagcagaaaagatctcgaagcgggg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6579 tataagaaaagacggagaacaacaacgatagaagaaagcagaaaagatctcgaagcgggg 6638
Query: 180 atgactcaacttctagataaagatatcttggtgattggtgttaagacagactccctcttc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6639 atgactcaacttctagataaagatatcttggtgattggtgttaagacagactccctcttc 6698
Query: 240 ccgtattggcaacaaagagagattgttgaacttttaaagggaccgaacgataatgtgaca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6699 ccgtattggcaacaaagagagattgttgaacttttaaagggaccgaacgataatgtgaca 6758
Query: 300 catgttgaattagacgagaatgcgtcattgtacggacacgatactttccttctagattta 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6759 catgttgaattagacgagaatgcgtcattgtacggacacgatactttccttctagattta 6818
Query: 360 gaaatagtcggatcgagcataggcaaattcctccgtgatcagctataaaccaaagattgt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6819 gaaatagtcggatcgagcataggcaaattcctccgtgatcagctataaaccaaagattgt 6878
Query: 420 gcataaatttatatagacaactttttttaatttgatacgactgcattagcgttattcctt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6879 gcataaatttatatagacaactttttttaatttgatacgactgcattagcgttattcctt 6938
Query: 480 actttgttttcataattatgaaatgtgaagtatgtatatatatacmagagtagcagattc 539
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 6939 actttgttttcataattatgaaatgtgaagtatgtatatatatacaagagtagcagattc 6998
Query: 540 tgctacaaataataaacgaagatcattttgaagcgtatggaaatatatctatcgttttcg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6999 tgctacaaataataaacgaagatcattttgaagcgtatggaaatatatctatcgttttcg 7058
Query: 600 ttttcggcattttcaattcctatagtattcttttaaaatctattgctcggaactgaacat 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7059 ttttcggcattttcaattcctatagtattcttttaaaatctattgctcggaactgaacat 7118
Query: 660 tttttccttacgagcagccttacgcttagcatcggcaaccttattcgaatccttaatcaa 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7119 tttttccttacgagcagccttacgcttagcatcggcaaccttattcgaatccttaatcaa 7178
Query: 720 aataacatcaccgaagaatttataatcttgcatataacgtctatccatattgaattcaga 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7179 aataacatcaccgaagaatttataatcttgcatataacgtctatccatattgaattcaga 7238
Query: 780 catagctgcattatccgttagacccaacttttgaatggtccagaaatatctttcaggcwg 839
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 7239 catagctgcattatccgttagacccaacttttgaatggtccagaaatatctttcaggctg 7298
Query: 840 atctttcttcaaatatctcaagatactttrtctttgttgtacc-aaattctcaacgctct 898
||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 7299 atctttcttcaaatatctcaagatactttgtctttgttgtaccaaaattctcaacgctct 7358
Query: 899 aatgttctt-aaatctttcttattctcc-ttacatgtttag-caagttat-rattctgac 954
||||||||| |||||||||||||||||| |||||||||||| |||||||| ||||||||
Sbjct: 7359 aatgttcttaaaatctttcttattctcctttacatgtttagccaagttatgaattctgac 7418
Query: 955 g 955
|
Sbjct: 7419 g 7419
>3x_Contig105
Length = 870
Score = 784 bits (394), Expect = 0.0
Identities = 435/448 (97%), Gaps = 1/448 (0%)
Strand = Plus / Minus
Query: 352 tagatttagaaatagtcggatcgagcataggcaaattcctccgtgatcagctataaacca 411
|||||||||||||||| |||| ||| ||||| ||||| | ||||| || |||||| ||
Sbjct: 455 tagatttagaaatagtgggatggaggatagggaaattggtgggtgatgaggtataaagca 396
Query: 412 aagattgtgcataaatttatatagacaactttttttaatttgatacgactgcattagcgt 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 aagattgtgcataaatttatatagacaactttttttaatttgatacgactgcattagcgt 336
Query: 472 tattccttactttgttttcataattatgaaatgtgaagtatgtatatatatacmagagta 531
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 335 tattccttactttgttttcataattatgaaatgtgaagtatgtatatatatacaagagta 276
Query: 532 gcagattctgctacaaataataaacgaagatcattttgaagcgtatggaaatatatctat 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gcagattctgctacaaataataaacgaagatcattttgaagcgtatggaaatatatctat 216
Query: 592 cgttttcgttttcggcattttcaattcctatagtattcttttaaaatctattgctcggaa 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 cgttttcgttttcggcattttcaattcctatagtattcttttaaaatctattgctcggaa 156
Query: 652 ctgaacattttttccttacgagcagccttacgcttagcatcggcaaccttattcgaatc- 710
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 ctgaacattttttccttacgagcagccttacgcttagcatcggcaaccttattcgaatcg 96
Query: 711 cttaatcaaaataacatcaccgaagaatttataatcttgcatataacgtctatccatatt 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 cttaatcaaaataacatcaccgaagaatttataatcttgcatataacgtctatccatatt 36
Query: 771 gaattcagacatagctgcattatccgtt 798
||||||||||||||||||||||||||||
Sbjct: 35 gaattcagacatagctgcattatccgtt 8
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8357
Number of Sequences: 1807
Number of extensions: 8357
Number of successful extensions: 70
Number of sequences better than 1.0e-20: 2
length of query: 955
length of database: 10,358,551
effective HSP length: 16
effective length of query: 939
effective length of database: 10,329,639
effective search space: 9699531021
effective search space used: 9699531021
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)